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CiteWeb id: 20090000064

CiteWeb score: 5674

Program MARK, a Windows 95 program, provides parameter estimates from marked animals when they are re-encountered at a later time. Re-encounters can be from dead recoveries (e.g., the animal is harvested), live recaptures (e.g. the animal is re-trapped or re-sighted), radio tracking, or from some combination of these sources of re-encounters.. The time intervals between re-encounters do not have to be equal, but are assumed to be 1 time unit if not specified. More than one attribute group of animals can be modeled, e.g., treatment and control animals, and covariates specific to the group or the individual animal can be used. The basic input to program MARK is the encounter history for each animal. MARK can also provide estimates of population size for closed populations. Capture ( p) and re-capture (c) probabilities for closed models can be modeled by attribute groups, and as a function of time, but not as a function of individual-specific covariates. Parameters can be constrained to be the same across re-encounter occasions, or by age, or by group, using the parameter index matrix (PIM). A set of common models for screening data initially are provided, with time effects, group effects, time group effects, and a null model of × none of the above provided for each parameter. Besides the logit function to link the design matrix to the parameters of the model, other link functions include the log-log, complimentary log-log, sine, log, and identity. Program MARK computes the estimates of model parameters via numerical maximum likelihood techniques. The FORTRAN program that does this computation also determines numerically the number of parameters that are estimable in the model, and reports its guess of one parameter that is not estimable if one or more parameters are not estimable. The number of estimable parameters is used to compute the quasi-likelihood AIC value (QAICc) for the model. Outputs for various models that the user has built (fit) are stored in a database, known as the Results Database. The input data are also stored in this database, making it a complete description of the model building process. The database is viewed and manipulated in a Results Browser window. Summaries available from the Results Browser window include viewing and printing model output (estimates, standard errors, and goodness-of-fit tests), deviance residuals from the model

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